![]() ☑️ Must register as an individual or team lead (teams no bigger than six people). Winners Announced/Closing Remarks from sponsorsĬontestant Eligibility, Terms and Submission Requirements Remarks from Partners, Stakeholders, and Sponsors TBDĬheck-in- bounce your ideas off an expertįinal Code-A-Thon 3-min presentations and judging $25,000 in prize money will be awarded by the following breakdown: ![]() Automatically updates as data sets in data portal are updated.Incorporates as many of the data sets provided as possible, as well as other publicly available data sources.Consider the Green Buildings Website as a stater point: Reports departments’ progress toward established sustainability goals.Visually engaging sustainability tools could include, but not be limited, a dashboard that: Contestants should be able to harness and visualize data sets to empower citizens and policy makers with data to evaluate the progress of each department toward established sustainability goals that will lead to better informed policy and implementation decisions. We want the public to leverage the pilot Statewide Open Data Portal and use publicly available data sources to help citizens and decision makers understand the state’s progress on achieving sustainability goals and to help policymakers and implementers inside state government make informed decisions.ĭrawing at least one data set available through the pilot Statewide Open Data Portal, this innovation contest will focus on creating apps, visualizations, and other tools that can help improve government sustainability practices. As part of the Innovation Contest (AB 2138- Gatto), the Government Operations Agency and the Department of General Services are looking for innovative solutions that will help California improve its sustainable operations and engage with the public. Contestant Eligibility, Terms and Submission RequirementsĪs the state deals with the effects of environmental change and the drought, California government seeks to find innovative ways to reduce waste in resources and increase sustainable practices.□ Data Steward Presentations Submissions Acumen doi: 10.1093/nar/25.1.43.□ This repository will serve as the central hub for our CA Green Gov Challenge contest submissions. Karp P., Riley M., Paley S., Pellegrini-Toole A., Krummenacker M. The BioCyc collection of microbial genomes and metabolic pathways. Karp P.D., Billington R., Caspi R., Fulcher C.A., Latendresse M., Kothari A., Keseler I.M., Krummenacker M., Midford P.E., Ong Q., et al. Pathway Tools version 24.0: Integrated software for pathway/genome informatics and systems biology arXiv. Karp P.D., Midford P., Paley S., Krummenacker M., Billington R., Kothari A., Ong W., Subhraveti P., Keseler I., Caspi R. Pathway Tools version 23.0 update: Software for pathway/genome informatics and systems biology. Karp P.D., Midford P., Billington R., Kothari A., Krummenacker M., Ong W., Subhraveti P., Caspi R., Keseler I., Paley S.M. The ready availability of organism-specific metabolic network diagrams and associated tools for almost any sequenced organism are useful for researchers working to better understand the metabolism of their organism and to interpret high-throughput datasets in a metabolic context.īiochemical pathways charts metabolic charts metabolic diagrams metabolic maps metabolic network diagrams metabolomics transcriptomics. The website contains whole-network diagrams for more than 18,000 sequenced organisms. These data can be overlaid on the metabolic charts to produce animated zoomable displays of metabolic flux and metabolite abundance. The diagrams also serve as tools for comparison of metabolic networks and for interpreting high-throughput datasets, including transcriptomics, metabolomics, and reaction fluxes computed by metabolic models. The diagrams are zoomable to enable researchers to study local neighborhoods in detail and to see the big picture. Search tools enable users to find genes, metabolites, enzymes, reactions, and pathways within a diagram. The software generates metabolic-network diagrams for unicellular organisms, for multi-cellular organisms, and for pan-genomes and organism communities. We have developed bioinformatics software tools that automatically generate a full metabolic-network diagram for an organism, and that enable searching and analyses of the network. Visualization of whole metabolic networks is critical for aiding researchers in understanding, analyzing, and exploiting those reconstructions. The convergence of genome sequencing and computational inference of metabolic networks has enabled great progress toward satisfying that demand by generating metabolic reconstructions from the genomes of thousands of sequenced organisms. Metabolomics, synthetic biology, and microbiome research demand information about organism-scale metabolic networks.
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